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Q-Value Calculator

Q-Value Calculator

Q-Value Calculator Effect Sizes (comma-separated): Weights (e.g., inverse variances, comma-separated): Calculate About the Q-Value Calculator The Q-Value Calculator is a specialized tool designed to compute the Q-value (or Q-statistic) used in statistical meta-analysis to assess heterogeneity among study results. This calculator is invaluable for researchers, statisticians, and students who need to evaluate whether observed differences […]

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False Discovery Rate Calculator

False Discovery Rate Calculator

False Discovery Rate Calculator Enter P-Values (comma-separated, e.g., 0.01, 0.05, 0.02): Desired FDR Level (e.g., 0.05 for 5%): Calculate FDR About the False Discovery Rate Calculator The False Discovery Rate Calculator is a powerful tool designed to assist researchers, statisticians, and scientists in controlling the false discovery rate (FDR) when performing multiple hypothesis tests. FDR,

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Fold Change Calculator

Fold Change Calculator

Fold Change Calculator Control Value (e.g., gene expression level): Experimental Value (e.g., gene expression level): Log Transformation: NoneLog2 Fold Change Calculate Fold Change About the Fold Change Calculator The Fold Change Calculator is a scientifically validated tool designed to assist researchers, students, and biochemists in calculating fold change, a critical metric for analyzing changes in

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Differential Expression Calculator

Differential Expression Calculator

Differential Expression Calculator Control Group Expression Level: Treatment Group Expression Level: Calculate About the Differential Expression Calculator The Differential Expression Calculator is a user-friendly tool designed to compute fold change and log2 fold change for differential gene expression analysis. This calculator is ideal for researchers, students, and professionals in bioinformatics and molecular biology. By inputting

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RNA-Seq Normalization Calculator

RNA-Seq Normalization Calculator

RNA-Seq Normalization Calculator Enter Gene Data (Tab-separated: Gene Name, Read Count, Gene Length in kb): Calculate TPM About the RNA-Seq Normalization Calculator The RNA-Seq Normalization Calculator is an innovative tool designed to assist researchers, students, and bioinformatics professionals in normalizing RNA-Seq data to obtain accurate gene expression levels. RNA-Seq is a powerful sequencing technique that

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Transcript Abundance Calculator

Transcript Abundance Calculator

Transcript Abundance Calculator Raw Read Count: Gene Length (bp): Total Mapped Reads (millions): Calculate Transcript Abundance (TPM) About the Transcript Abundance Calculator The Transcript Abundance Calculator is a scientifically robust tool designed to help researchers, bioinformaticians, and students quantify transcript abundance in RNA sequencing (RNA-seq) experiments. Developed with support from resources at Agri Care Hub,

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Alternative Splicing Calculator

Alternative Splicing Calculator

Alternative Splicing Calculator Number of Exons: Number of Exon Skipping Events: Number of Alternative 5′ Splice Sites: Number of Alternative 3′ Splice Sites: Calculate About the Alternative Splicing Calculator The Alternative Splicing Calculator is an innovative tool designed to estimate the number of possible protein isoforms generated through Alternative Splicing for a given gene. By

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Splice Site Calculator

Splice Site Calculator

Splice Site Calculator Enter DNA Sequence (e.g., intron-exon boundary): Predict Splice Sites About the Splice Site Calculator The Splice Site Calculator is an innovative tool designed to assist researchers, students, and professionals in bioinformatics by predicting potential splice site mutations in DNA sequences. Splice sites are critical regions at intron-exon boundaries where pre-mRNA splicing occurs,

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Exon Junction Calculator

Exon Junction Calculator

Exon Junction Calculator Enter Exon Sequence (DNA/RNA, 5′ to 3′): Upstream Intron Size (bp): Organism: HumanMouseYeastArabidopsis Splice Site Type: Canonical (GU-AG)Non-canonical Calculate EJC Deposition Sites About the Exon Junction Calculator The Exon Junction Calculator is a scientifically validated tool designed to assist molecular biologists, geneticists, and researchers in identifying and predicting exon junction complex (EJC)

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